Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 773
Gene Symbol: CACNA1A
CACNA1A
0.100 CausalMutation disease CLINVAR CACNA1A haploinsufficiency causes cognitive impairment, autism and epileptic encephalopathy with mild cerebellar symptoms. 25735478 2015
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.090 AlteredExpression disease BEFREE The protein product, FMRP, is highly expressed in neurons of the normal mammalian brain, and absent or in low levels in leukocytes from individuals with fragile X (FraX)-associated mental impairment. 9916838 1999
Entrez Id: 4208
Gene Symbol: MEF2C
MEF2C
0.030 AlteredExpression disease BEFREE Pathogenicity of MEF2C overexpression is still unclear as only four patients with mild intellectual deficiency carrying 5q14.3 microduplications containing MEF2C are described in the literature. 31375103 2019
Entrez Id: 1859
Gene Symbol: DYRK1A
DYRK1A
0.020 AlteredExpression disease BEFREE Small molecule inhibition of DYRK1A activity in the brain may provide an avenue for pharmaceutical intervention of mental impairment associated with AD and other neurodegenerative diseases. 23173067 2012
Entrez Id: 340533
Gene Symbol: NEXMIF
NEXMIF
0.010 AlteredExpression disease BEFREE Interestingly, the patient with decreased KIAA2022 expression had only mild ID with severe language delay and repetitive behaviors falling in the range of an autism spectrum disorder (ASD). 23615299 2013
Entrez Id: 2904
Gene Symbol: GRIN2B
GRIN2B
0.110 Biomarker disease BEFREE Missense variants of GRIN1, GRIN2A, and GRIN2B cause similar syndromes with varying severity of intellectual impairment, autism, epilepsy, and motor dysfunction. 31299220 2019
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.090 Biomarker disease BEFREE Fragile X syndrome (FXS) is an inherited intellectual impairment that results from the loss of fragile X mental retardation protein (FMRP), an mRNA binding protein that regulates mRNA translation at synapses. 31350260 2019
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.090 Biomarker disease BEFREE How does the absence of FMRP cause misregulation of protein synthesis, which in turn leads to mental impairment in fragile X syndrome? 12112449 2002
Entrez Id: 2477
Gene Symbol: FRAXA
FRAXA
0.030 Biomarker disease BEFREE We conclude that the excess of intermediate and premutation sized alleles for FRAXA may well be a contributing factor to the boys' mental impairment, while that for FRAXE may be a chance finding. 10851251 2000
Entrez Id: 2477
Gene Symbol: FRAXA
FRAXA
0.030 Biomarker disease BEFREE This suggests that relatively large unmethylated repeats of sizes 41-60 for FRAXA and 31-60 for FRAXE may play some role in mental impairment. 8776586 1996
Entrez Id: 2481
Gene Symbol: FRAXE
FRAXE
0.020 Biomarker disease BEFREE This suggests that relatively large unmethylated repeats of sizes 41-60 for FRAXA and 31-60 for FRAXE may play some role in mental impairment. 8776586 1996
Entrez Id: 57532
Gene Symbol: NUFIP2
NUFIP2
0.020 Biomarker disease BEFREE Fragile X syndrome (FXS) is an inherited intellectual impairment that results from the loss of fragile X mental retardation protein (FMRP), an mRNA binding protein that regulates mRNA translation at synapses. 31350260 2019
Entrez Id: 2481
Gene Symbol: FRAXE
FRAXE
0.020 Biomarker disease BEFREE A relationship between FRAXE and non-specific mental impairment is strongly suggested by the occurrence in these families of more mentally impaired male and female carriers, after removal of index cases, than could reasonably be expected by chance. 7783162 1995
Entrez Id: 338811
Gene Symbol: TAFA2
TAFA2
0.020 Biomarker disease BEFREE Among them, Tafa-2 is identified as one of the potential genes responsible for intellectual deficiency in a patient with mild mental retardation. 30137205 2018
Entrez Id: 383
Gene Symbol: ARG1
ARG1
0.020 Biomarker disease BEFREE ARG1-deficient patients exhibit hyperargininemia with spastic paraparesis, progressive neurological and intellectual impairment, persistent growth retardation, and infrequent episodes of hyperammonemia, a clinical pattern that differs strikingly from other urea cycle disorders. 26467175 2015
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.020 Biomarker disease BEFREE Hereditary spastic paraplegia with mental impairment and thin corpus callosum in Tunisia: SPG11, SPG15, and further genetic heterogeneity. 18332254 2008
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.020 Biomarker disease BEFREE Three additional families with likely pathogenic KIAA2022 mutations were discovered within the frame of systematic parallel sequencing of familial cases of XLID or in the context of routine array-CGH evaluation of sporadic intellectual deficiency (ID) cases. 23615299 2013
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.020 Biomarker disease BEFREE Intragenic rearrangements in X-linked intellectual deficiency: results of a-CGH in a series of 54 patients and identification of TRPC5 and KLHL15 as potential XLID genes. 24817631 2014
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.020 Biomarker disease BEFREE SPG11, an AR-HSP (synonym: HSP11), is a complicated HSP associated with a slowly progressive spastic paraparesis, mental impairment and the development of a thin corpus callosum (TCC) during the course of the disease. 16773502 2006
Entrez Id: 4128
Gene Symbol: MAOA
MAOA
0.010 Biomarker disease BEFREE MAOB deficient patients exhibit normal clinical characteristics and behavior, while MAOA deficient patients have borderline intellectual deficiency and impaired impulse control. 22365943 2012
Entrez Id: 26609
Gene Symbol: VCX
VCX
0.010 Biomarker disease BEFREE Moreover, we propose a VCX/Y teamwork-dependent mechanism for the incidence of mental impairment in XLI patients. 15888481 2005
Entrez Id: 2290
Gene Symbol: FOXG1
FOXG1
0.010 Biomarker disease BEFREE 4.45 Mb microduplication in chromosome band 14q12 including FOXG1 in a girl with refractory epilepsy and intellectual impairment. 19772934 2010
Entrez Id: 2874
Gene Symbol: GPS2
GPS2
0.010 Biomarker disease BEFREE The 3 tumor suppressor genes KCTD11, DLG4, and GPS2, in addition to the GABARAP gene, have a known or suspected function in neuronal development and are candidates for causing mental impairment in our patients. 19617690 2009
Entrez Id: 3265
Gene Symbol: HRAS
HRAS
0.010 Biomarker disease BEFREE Our data indicate that astrocytes expressing mutant HRAS dysregulate cortical maturation during development as shown by abnormal extracellular matrix remodeling and implicate excessive astrocyte-to-neuron signaling as a possible drug target for treating mental impairment and enhancing neuroplasticity. 25947161 2015
Entrez Id: 414
Gene Symbol: ARSD
ARSD
0.010 Biomarker disease BEFREE Forty-one participants with ASD and no intellectual impairment, aged 12-17 years, were randomly assigned to an immediate intervention or a delayed-intervention group. 30095232 2018